Papers/Books
under construction
89 Publications
2019
Ecological and genomic attributes of novel bacterial taxa that thrive in subsurface soil horizons. Brewer, Tess E., Emma L. Aronson, Keshav Arogyaswamy, Sharon A. Billings, Jon K. Botthoff, Ashley N. Campbell, Nicholas C. Dove, Dawson Fairbanks, Rachel E. Gallery, Stephen C. Hart, Jason Kaye, Gary King, Geoffrey Logan, Kathleen A. Lohse, Mia R. Maltz, Emilio Mayorga, Caitlin O’Neill, Sarah M. Owens, Aaron Packman, Jennifer Pett-Ridge, Alain F. Plante, Daniel D. Richter, Whendee L. Silver, Wendy H. Yang, Noah Fierer (2019): mBio Oct 2019, 10 (5) e01318-19 Cross-CZO National
2018
Beyond clay: towards an improved set of variables for predicting soil organic matter content. Rasmussen C., Heckman K., Wieder W.R., Keiluweit M., Lawrence C.R., Berhe A.A., Blankinship J.C., Crow S.E., Druhan J.L., Hicks Pries C.E., Marin-Spiotta E., Plante A.F., Schädel C., Schimel J.P., Sierra C.A., Thompson A., Wagai R. (2018): Biogeochemistry 137(3): 297–306 Cross-CZO
2017
Reviews and syntheses: on the roles trees play in building and plumbing the critical zone. Brantley, Susan L., David M. Eissenstat, Jill A. Marshall, Sarah E. Godsey, Zsuzsanna Balogh-Brunstad, Diana L. Karwan, Shirley A. Papuga, Joshua Roering, Todd E. Dawson, Jaivime Evaristo, Oliver Chadwick, Jeffrey J. McDonnell, Kathleen C. Weathers (2017): Biogeosciences, 14, 5115-5142 Cross-CZO National
2016
Variation of organic matter quantity and quality in streams at Critical Zone Observatory watersheds. Miller, Matthew P., Boyer, Elizabeth W., McKnight, Diane M., Brown, Michael G., Gabor, Rachel S., Hunsaker, Carolyn T., Iavorivska, Lidiia, Inamdar, Shreeram, Johnson, Dale W., Kaplan, Louis A., Lin, Henry, McDowell, William H., Perdrial, Julia N. (2016): Water Resources Research, 52 (10): 8202–8216 Cross-CZO
2015 (In Press)
Multi-elemental scanning transmission X-ray microscopy–near edge X-ray absorption fine structure spectroscopy assessment of organo–mineral associations in soils from reduced environments. Chen, C. and D.L. Sparks (2015): Environmental Chemistry
2015
Soil moisture response to snowmelt timing in mixed-conifer subalpine forests. Harpold A. A., Molotch N. P., Musselman K. N., Bales R. C., Kirchner P. B., Litvak M. and Brooks P. D. (2015): Hydrological Processes 29(12): 2782–2798 Cross-CZO
2015
Laser vision: lidar as a transformative tool to advance critical zone science. Harpold, A. A., Marshall, J. A., Lyon, S. W., Barnhart, T. B., Fisher, B. A., Donovan, M., Brubaker, K. M., Crosby, C. J., Glenn, N. F., Glennie, C. L., Kirchner, P. B., Lam, N., Mankoff, K. D., McCreight, J. L., Molotch, N. P., Musselman, K. N., Pelletier, J., Russo, T., Sangireddy, H., Sjöberg, Y., Swetnam, T., and West, N. (2015): Hydrol. Earth Syst. Sci., 19, 2881-2897 Cross-CZO National
2015 (In Review)
Beryllium-7 wet deposition variation with storm height, synoptic classification, and tree canopy state in the mid-Atlantic USA. Karwan, D.L, C.M. Siegert, D.F. Levia, J.E. Pizzuto, A.K Aufdenkampe (2015): Hydrological Processes
2015 (In Review)
Run-of-river impoundments pass bed material and establish equilibrium bed morphology while remaining largely unfilled with sediment in Northern Delaware. Pearson, A.J., and Pizzuto, J.E. (2015): Geomorphology
2015
Geophysical imaging reveals topographic stress control of bedrock weathering. St. Clair, J., S. Moon, W. S. Holbrook, J. T. Perron, C. S. Riebe, S. J. Martel, B. Carr, C. Harman, K. Singha, D. deB. Richter (2015): Science 350 (6260): 534-538 Cross-CZO National
2015 (In Review)
Nutrient spiraling and transport in streams -- The importance of instream biological processes to nutrient dynamics in streams. Webster, J. R., Newbold, J. D. and Laurence, L. (2015): In Jones, J.W., and Stanley, E. H., editors. Streams Ecosystems in a Changing Environment, Elsevier. ISBN: 9780124058903
2015
Chapter 2 – The Role of Critical Zone Observatories in Critical Zone Science. White T., Brantley S., Banwart S., Chorover J., Dietrich W., Derry L., Lohse K., Anderson S., Aufdendkampe A., Bales R., Kumar P., Richter D., McDowell B. (2015): Developments in Earth Surface Processes 19: 15–78 Cross-CZO National
2015 (In Review)
The Geochemical Transformation of Soils by Agriculture and Its Dependence on Soil Erosion: an Application of Geochemical Mass Balance Approach. Yoo, K., B. Wenell, J. Ji, A. Aufdenkampe, J. Marquard, J. Klaminder (2015): Science of the Total Environment
2014
Properties of Fe-organic matter associations via coprecipitation versus adsorption. Chen, C., J. Dynes, J. Wang and D.L. Sparks (2014): Environ. Sci. Technol. 48 (23):13751–13759
2014
Soft X-ray Spectromicroscopy Study of Mineral-Organic Matter Associations in Pasture Soil Clay Fractions. Chen, C., J. Dynes, J. Wang, T. Regier, C. Karunakaran, and D.L. Sparks (2014): Environ. Sci. Technol., 2014, 48 (12), pp 6678–6686
2014
Storm event patterns of particulate organic carbon (POC) for large storms and differences with dissolved organic carbon (DOC). Dhillon, G.S., and S.P. Inamdar (2014): Biogeochemistry, 118:61-81
2014
Soil organic matter stability in organo-mineral complexes as a function of increasing carbon loading. Feng, W., A. Plante, A.K. Aufdenkampe, J. Six (2014): Soil Biology and Biochemistry 69, 398-405
2014
Model My Watershed: Connecting Students’ Conceptual Understanding of Watersheds to Real-World Decision Making. Gill, S. E., N. Marcum-Dietrich, and R. Becker-Klein (2014): J. Geosci. Educ. 62 (1): 61–73
2014
What makes Darwinian hydrology "Darwinian"? Asking a different kind of question about landscapes. Harman C. and Troch P.A. (2014): Hydrology and Earth System Sciences 18: 417-433 Cross-CZO
2014
Spatial patterns of vegetation, soils and microtopography from terrestrial laser scanning on two semi-arid hillslopes of contrasting lithology. Harman C.J., Lohse K.A., Troch P.A., Sivapalan M. (2014): Journal of Geophysical Research: Biogeosciences 119(2): 163-180 Cross-CZO
2014
The delivery of dissolved organic carbon from a forest hillslope to a headwater stream. Mei, Y. Hornberger, G., Kaplan, L. A., Newbold, J. D., & Aufdenkampe, A. K. (2014): Water Resources Research 50 (7): 5774–5796
2014
Long term storage and transport length scale of fine sediment: Analysis of a mercury release into a river. Pizzuto, J.E. (2014): Geophysical Research Letters, 41
2014
Characteristic Length Scales and Time-Averaged Transport Velocities of Suspended Sediment In the Mid-Atlantic Region, USA. Pizzuto, J.E., Schenk, E.R., Hupp. C.R., Gellis, A., Noe, G., Williamson, E., Karwan, D.L., O’Neal, M., Marquard, J., Aalto, R., D. Newbold (2014): Water Resources Research, 50:1-12
2014
Hydrologic dynamics and geochemical responses within a floodplain aquifer and hyporheic zone during Hurricane Sandy. Sawyer, A.H., L.A. Kaplan, O. Lazareva, and H.A. Michael (2014): Water Resources Research, 50 (6): 4877–4892
2014
Stratigraphic controls on surface water-groundwater exchange and geochemical fluxes across the sediment-water interface of an estuary. Sawyer, A.H., O. Lazareva, K. Kroeger, K. Crespo, T. Stieglitz, C.S. Chan, and H.A. Michael (2014): Limnology & Oceanography, 59(3) 997–1010
2014
Changes in dissolved organic matter (DOM) amount and composition along nested headwater stream locations during baseflow and stormflow. Singh, S., S. Inamdar, and M. Mitchell (2014): Hydrological Processes
2014
Seasonal pattern of dissolved organic matter (DOM) in watershed sources: Influence of hydrologic flow paths and autumn leaf fall. Singh, S., S. Inamdar, M. Mitchell, and P. McHale (2014): Biogeochemistry, 118: 321-337
2014
Reconstructing suspended sediment mercury contamination of a steep, gravel-bed river using reservoir theory. Skalak, K., and J. Pizzuto (2014): Environmental Geosciences, 20 (1):17-35
2014
A coupled geochemical and biogeochemical approach to characterize the bioreactivity of dissolved organic matter from a headwater stream. Sleighter, R. L., R. M. Cory, L. A. Kaplan, H. A. N. Abdulla, and P. G. Hatcher (2014): Journal of Geophysical Research: Biogeochemistry 119 (8):1520-1537
2014
Streamside Forest Buffer Width Needed to Protect Stream Water Quality, Habitat, and Organisms: A Literature Review. Sweeney, B. W., and Newbold, J. D. (2014): Journal of the American Water Resources Association 50 (3):560–584
2013
Extreme storms and changes in particulate and dissolved organic carbon in runoff: Entering uncharted waters?. Dhillon, G., and S. Inamdar (2013): Geophysical Research Letters. Vol 40, 1-6
2013
Developing a web application for the integration of real-world, scientific, problem-solving into the secondary classroom. Gill, S. E., Marcum-Dietrich, N. & Fraser, J. (2013): In A. D. Ritzhaupt & Swapna Kumar (Eds.) Cases on Educational Technology Implementation for Facilitating Learning. Hershey, PA: IGI Global.
2013
Solute-specific scaling of inorganic nitrogen and phosphorus uptake in streams. Hall, R. O., Jr., M. A. Baker, E. J. Rosi-Marshall, J. L. Tank, and J. D. Newbold (2013): Biogeosciences 10:7323-7331 Cross-CZO
2013
Temporal variation in end-member chemistry and its influence on runoff mixing patterns in a forested, Piedmont catchment. Inamdar, S.P., G. Dhillon, S. Singh, S. Dutta, D.F. Levia, D. Scott, M.J. Mitchell, J.T. Van Stan, & P. McHale (2013): Water Resources Research, 49: 1828–1844
2013
Seawater circulation in sediments driven by interactions between seabed topography and fluid density. Konikow, L.F., Akhavan, M., C. Langevin, H.A. Michael, and A.H. Sawyer (2013): Water Resources Research, 49: 1386–1399
2013
Biological lability of dissolved organic carbon in stream water and contributing terrestrial sources. McLaughlin, C., and L. A. Kaplan (2013): Freshwater Science 32(4):1219-1230
2013
Measuring heterotrophic respiration rates of suspended particulate organic carbon from stream ecosystems. Richardson, D. C., J. D. Newbold, A. K. Aufdenkampe, P. G. Taylor, and L. A. Kaplan (2013): Limnology and Oceanography-Methods 11:247-261
2013
Geologic effects on groundwater salinity and discharge into an estuary. Russoniello, C.J., C. Fernandez, J.F. Bratton, D.E. Krantz, J.F. Banaszak, A.S. Andres, L.F. Konikow, and H.A. Michael (2013): Journal of Hydrology, 498:1–12
2013
Dynamic response of surface water-groundwater exchange to currents, tides, and waves in a shallow estuary. Sawyer, A.H., F. Shi, J. Kirby, H.A. Michael (2013): Journal of Geophysical Research – Oceans, 118
2013
Comparison of Two PARAFAC Models of Dissolved Organic Matter Fluorescence for a Mid-Atlantic Forested Watershed in the USA. Singh, S., S. Inamdar, and D. Scott (2013): Journal of Ecosystems
2013
A variable source area for groundwater evapotranspiration: impacts on modeling stream flow. Tsang, Y.-P., Hornberger, G., Kaplan, L. A., Newbold, J. D. and Aufdenkampe, A. K. (2013): Hydrol. Process.
2013
Evaluation of an instrumental method to reduce error in canopy water storage estimates via mechanical displacement. Van Stan J.T., K.A. Martin, J. Friesen, M.T. Jarvis, J.D. Lundquist, & D.F. Levia (2013): Water Resources Research
2012
210Pb geochronology of flood events in large tropical river systems. Aalto, R. and Nittrouer, C. (2012): Phil. Trans. R. Soc. A (2012) 370, 2040–2074
2012
Biological lability of streamwater fluorescent dissolved organic matter. Cory, Rose M. and L. A. Kaplan (2012): Limnology and Oceanography, 57(5):1347–1360
2012
Predicting the accumulation of mercury-contaminated sediment on riverbanks—An analytical approach. Jim Pizzuto (2012): Water Resources Research Vol. 48, W07518
2012
Stemflow and dissolved organic carbon cycling: temporal variability in concentration, flux, and UV-vis spectral metrics in a temperate broadleaved deciduous forest in the eastern USA. Levia, D.F.*, J.T. Van Stan*, S.P. Inamdar, M.T. Jarvis, M.J. Mitchell, S.M. Mage, C.E. Scheick, & P.J. McHale (2012): Canadian Journal of Forest Research 42: 207-216. [* equal contributors]
2012
Turbulent particle transport in streams: Can exponential settling be reconciled with fluid mechanics?. McNair, J. N. and J. D. Newbold (2012): Journal of Theoretical Biology 300:62-80
2012
Estimation of dissolved organic carbon contribution from hillslope soils to a headwater stream. Mei, Y., G. M. Hornberger, L. A. Kaplan, J. D. Newbold, and A. K. Aufdenkampe (2012): Water Resour. Res. 48(9)
2012
Scaling the gas transfer velocity and hydraulic geometry in streams and small rivers. Raymond, P. A., C. J. Zappa, D. Butman, T. L. Bott, C. Potter, P. Mulholland, A. E. Laursen, W. H. McDowell, and D. Newbold (2012): Limnology and Oceanography: Fluids and Environments 2:41-53
2012
Controls and dynamics of canopy-derived dissolved organic matter from co-dominant broadleaved deciduous canopies to the soil of a temperate catchment in the northeastern United States. Van Stan, J.T. (2012): Publications in Climatology 64: 1-96
2012
The effects of phenoseason and storm characteristics on throughfall solute washoff and leaching dynamics from a temperate deciduous forest canopy. Van Stan, J.T., D.F. Levia, S.P. Inamdar, M. Lepori-Bui, & M.J. Mitchell (2012): Science of the Total Environment 430: 48-58
2011
Riverine coupling of biogeochemical cycles between land, oceans, and atmosphere. Aufdenkampe, A. K., Mayorga, E., Raymond, P. A., Melack, J. M., Doney, S. C., Alin, S. R., Aalto, R. E., and Yoo, K. (2011): Frontiers in Ecology and the Environment 9:53-60.
2011
Dissolved organic matter (DOM) concentration and quality in a forested mid-Atlantic watershed, USA . Inamdar, S., Finger, N., Singh, S., Mitchell, M., Levia, D., Bais, H., Scott, D., and McHale, P. (2011): Biogeochemistry 108 (1) 55-76
2011
Fluorescence characteristics and sources of dissolved organic matter for stream water during storm events in a forested mid-Atlantic watershed. Inamdar, S., Singh, S., Dutta, S., Levia, D., Mitchell, M., Scott, D., Bais, H., and McHale P. (2011): J. Geophys. Res. 116:G03043.
2011
Characterization and Source Determination of Stream Suspended Particulate Material in White Clay Creek, USA. Karwan, D.L., R. Aalto, A.K. Aufdenkampe, J.D. Newbold, J.E. Pizzuto (2011): Applied Geochemistry 26:5354-5356
2011
Atmospheric deposition and corresponding variability of stemflow chemistry across temporal scales in a mid-Atlantic broadleaved deciduous forest canopy. Levia, D.F., J.T. Van Stan, C.M. Siegert, S.P. Inamdar, M.J. Mitchell, S.M. Mage, & P.J. McHale (2011): Atmospheric Environment 45: 3046-3054
2011
Improving biogeochemical knowledge through technological innovation. Melack, J., Finzi, A. C., Siegel, D., MacIntyre, S., Nelson, C., Aufdenkampe, A. K., and Pace M. (2011): Frontiers in Ecology and the Environment 9:37-43.
2011
Effects of wind-driven rainfall on stemflow generation between two codominant tree species with differing crown characteristics. Van Stan, J.T., C.M. Siegert, D.F. Levia, & C.E. Scheick (2011): Agricultural and Forest Meteorology 151: 1277-1286
2011
Technical note: Instrumental method for reducing error in compression-derived measurements of rainfall interception for individual trees. Van Stan, J.T., M.T. Jarvis, D.F. Levia, & J. Friesen (2011): Hydrological Sciences Journal 56: 1061-1066
2011
Rates of soil mixing and associated carbon fluxes in a forest vs tilled agricultural field: implications for modelling the soil carbon cycle. Yoo, K., Ji, J., Aufdenkampe, A., and Klaminder, J. (2011): Journal of Geophysical Research - Biogeosciences 116:G01014.
2011
The Initial Design of Data Sharing Infrastructure for the Critical Zone Observatory. Zaslavsky, I., T. Whitenack, M. Williams, D. G. Tarboton, K. Schreuders, and A. Aufdenkampe (2011): Proceedings of the Environmental Information Management Conference, Santa Barbara, CA, 28-29 September, EIM'2011, pp. 145-150 Cross-CZO National
2010
Temporal variability of stemflow volume in a beech-yellow poplar forest in relation to tree species and size. Levia, D.F., Van Stan, II, J.T., Mage, S.M., and Kelley-Hauske, P.W. (2010): Journal of Hydrology 380 (1/2):112-120.
2010
Water quality functions of a 15-year-old riparian forest buffer system. Newbold, J. D., S. Herbert, B. W. Sweeney, P. Kiry, and S. J. Alberts (2010): Journal of the American Water Resources Association. 1-12
2009
The boundless carbon cycle. Battin, T. J., S. Luyssaert, L. A. Kaplan, A. K. Aufdenkampe, A. Richter, and L. J. Tranvik (2009): Nature Geoscience 2:598-600
2009
Mitigation of agricultural nonpoint pollution by a reforested riparian buffer in the Mid-Atlantic Piedmont. Newbold, J. D., S. Herbert, and B. W. Sweeney (2009): Stroud Preserve Watersheds National Monitoring Project. Final report. Stroud Water Research Center, Avondale, PA, USA, 53 pp.
2009
Temporal dynamics of seston: A recurring nighttime peak and seasonal shifts in composition in a stream ecosystem. Richardson, D. C., L. A. Kaplan, J. D. Newbold, and A. K. Aufdenkampe (2009): Limnology and Oceanography 54:344-354
2008
Biophysical controls on organic carbon fluxes in fluvial networks. Battin, T. J., L. A. Kaplan, S. Findlay, C. S. Hopkinson, E. Marti, A. I. Packman, J. D. Newbold, and F. Sabater (2008): Nature Geoscience 1:95-100
2008
Biome-level biogeography of streambed microbiota. Findlay, R. H., C. Yeates, M. A. J. Hullar, D. A. Stahl, and L. A. Kaplan (2008): Applied and Environmental Microbiology 74:3014-3021
2008
Untangling the complex issue of dissolved organic carbon uptake: a stable isotope approach. Kaplan, L. A., T. N. Wiegner, J. D. Newbold, P. H. Ostrom, and H. Gandhi (2008): Freshwater Biology 53:855-864
2007
How planting method, weed abatement, and herbivory affect afforestation success. Sweeney, B. W., S. J. Czapka, and C. Petrow (2007): Southern Journal of Applied Forestry 31:85-92
2006
Primary productivity and community respiration. Bott, T. L. (2006): Methods in Stream Ecology, 2nd ed., pp.263-290. Elsevier, New York
2006
Ecosystem metabolism in Piedmont streams: reach geomorphology modulates the influence of riparian vegetation. Bott, T. L., J. D. Newbold, and D. B. Arscott (2006): Ecosystems 9:398-421
2006
Recurring seasonal dynamics of microbial communities in stream habitats. Hullar, M. A. J., L. A. Kaplan, and D. A. Stahl (2006): Applied and Environmental Microbiology 72:713-722
2006
Biodegradable dissolved organic matter in a temperate and a tropical stream determined from ultra-high resolution mass spectrometry. Kim, S., L. A. Kaplan, and P. G. Hatcher (2006): Limnology and Oceanography, 51:1054-1063
2005
Contribution of dissolved organic carbon to stream metabolism estimated with 13C-enriched tree tissue leachate. Wiegner, T. N., L. A. Kaplan, J. D. Newbold, and P. H. Ostrom (2005): Journal North American Benthological Society 24:48-67
2004
Riparian Deforestation, Stream Narrowing, and Loss of Stream Ecosystem Services. Sweeney, B. W., T. L. Bott, J. K. Jackson, L. A. Kaplan, J. D. Newbold, L.J. Standley, W. C. Hession, and R. J. Horwitz (2004): Proceedings of the National Academy of Sciences 101:14132-14137
2003
Contributions of microbial biofilms to ecosystem processes in stream mesocosms. Battin, T. J., L. A. Kaplan, J. D. Newbold, and C. E. Hansen (2003): Nature 426:439-442
2003
A mixing model analysis of stream solute dynamics and the contribution of a hyporheic zone to ecosystem function. Battin, T. J., L. A. Kaplan, J. D. Newbold, and S. P. Hendricks (2003): Freshwater Biology:48:995-1014
2003
Effects of current velocity on the nascent architecture of stream microbial biofilms. Battin, T. J., L. A. Kaplan, J. D. Newbold, X. Cheng, and C. Hansen (2003): Applied and Environmental Microbiology. 63:5443-5452
2003
The role of monomers in stream ecosystem metabolism. Kaplan, L. A., and J. D. Newbold (2003): Aquatic Ecosystems: Interactivity of Dissolved Organic Matter, pp. 97-119. S. E. G. Findlay and R. L. Sinsabaugh (eds.). Academic Press.
2003
Where rivers are born: The scientific imperative for defending small streams and wetlands. Meyer, J. L., L. A. Kaplan, J. D. Newbold, D. L. Strayer, C. J. Woltemade, J. B. Zedler, R. Beilfuss, Q. Carpenter, R. Semlitsch, M.C. Watzin, and P. H. Zedler (2003): Sierra Club and American Rivers
2002
Riparian forest restoration: Increasing success by reducing plant competition and herbivory. Sweeney, B. W., S. J. Czapka, and T. Yerkes (2002): Restoration Ecology 10(2): 1 - 9
2000
Paired comparisons of effects of type of riparian vegetation on stream fishes: implications for restoration. Horwitz, R. J., W. C. Hession, and B. W. Sweeney (2000): American Water Resources Association 197-202
2000
Surface and subsurface dissolved organic carbon. Kaplan, L. A., and J. D. Newbold (2000): Streams and Ground Waters, J. B. Jones and P. J. Mulholland (eds.), pp. 237-258. Academic Press.
1997
Organic matter dynamics in White Clay Creek, Pennsylvania, USA. Newbold, J. D., T. L. Bott, L. A. Kaplan, B. W. Sweeney, and R. L. Vannote (1997): Pages 46 - 50 in J. R. Webster and J. L. Meyers (editors). Stream organic matter budgets. Journal of the North American Benthological Society 16:3-161
1995
Measurement of streamwater biodegradable dissolved organic carbon with a plug-flow bioreactor. Kaplan, L. A. and J. D. Newbold (1995): Water Research 29:2696-2706
1993
Sources and biogeochemistry of terrestrial dissolved organic carbon entering streams. Kaplan, L. A., and J. D. Newbold (1993): pp. 139 - 165 in T. E. Ford, ed. Aquatic microbiology: an ecological approach. Blackwell Scientific
1993
Effects of streamside vegetation on macroinvertebrate communities of White Clay Creek in Eastern North America. Sweeney, B. W. (1993): Proceedings of The Academy of Natural Sciences of Philadelphia 144:291-340
1992
Streamside forests and the physical, chemical, and trophic characteristics of piedmont streams in Eastern North America. Sweeney, B. W. (1992): Water Science and Technology 26:2653-2673
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